Aqueous trifluorethanol solutions simulate the environment of DNA in the crystalline state.
نویسندگان
چکیده
We took 28 fragments of DNA whose crystal structures were known and used CD spectroscopy to search for conditions stabilising the crystal structures in solution. All 28 fragments switched into their crystal structures in 60-80% aqueous trifluorethanol (TFE) to indicate that the crystals affected the conformation of DNA like the concentrated TFE. The fragments crystallising in the B-form also underwent cooperative TFE-induced changes that took place within the wide family of B-form structures, suggesting that the aqueous and crystal B-forms differed as well. Spermine and magnesium or calcium cations, which were contained in the crystallisation buffers, promoted or suppressed the TFE-induced changes of several fragments to indicate that the crystallisation agents can decide which of the possible structures is adopted by the DNA fragment in the crystal.
منابع مشابه
Conformational transitions of poly(dA-bromo5dU) and poly(dA-iodo5dU) in solution.
Extensive circular dichroism studies have been conducted with the title polynucleotides under various solution conditions. The studies provided the following information: (i) The halogen atoms in place of thymine methyl hinder the isomerization into X-DNA. (ii) The brominated but not iodinated polynucleotide isomerizes into Z-DNA in concentrated NaCl+NiCl2. The transition takes place at lower N...
متن کاملCorrelation and Prediction of Acid Gases Solubility in Various Aqueous Alkanolamine Solutions Using Electrolyte Cubic Square-Well Equation of State
The object of this work is solubility correlation and prediction of CO2 and H2S in various aqueous alkanolamines using the electrolyte cubic square-well equation of state (eCSW EoS) (Haghtalab, A.,Mazloumi, S. H., (2010), Electrolyte Cubic Square-Well Equation of State for Computation of the Solubility CO2 and H2S in Aqueous MDEA Solutions, Ind. Eng. Chem. Res.,49,6221-623). The eEoS systemati...
متن کاملCorrelation of Viscosity of Aqueous Solutions of Alkanolamine Mixtures Based on the Eyring's Theory and Wong-Sandler Mixing Rule
A viscosity model, based on Eyring’s absolute rate theory combined with a cubic PR equation of state and Wong-Sandler mixing rule, has been proposed in order to correlate viscosities of aqueous solutions of alkanolamine mixtures at atmospheric pressure and different temperatures. In the proposed method, the energy and size parameters in studied Equation of State (EoS) have been obtained usi...
متن کاملPhotocatalytic Removal of Acid Blue 113 Dye from Aqueous Solutions Using Zinc Oxide-Kaolin Nanocomposite under Visible Light Irradiation
Background and purpose: Textile industries produce huge amounts of colored wastewater. Synthetic dyes cause serious problems to human health and aquatic organisms due to their toxic and carcinogenic properties. In this study, Acid Blue 113 (AB113), which is stable and persistent against conventional treatment methods was selected as the target contaminant. Materials and methods: The synthesis ...
متن کاملEfficiency in phenol removal from aqueous solutions of pomegranate peel ash as a natural adsorbent
Background: Phenol is an organic pollutant found in industrial effluents that is very toxic to humans and the environment. This study used pomegranate peel ash as a natural absorbent to remove phenol from aqueous solutions. Methods: In this study, pomegranate peel ash in different doses was used as a new adsorbent for the removal of phenol. The effects of contact time, pH, adsorbent dose and i...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Nucleic acids research
دوره 27 17 شماره
صفحات -
تاریخ انتشار 1999